Insertion junction: CLIP2.055669_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055669
Chromosome:chromosome 3
Location:6722092
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196000 (1 of 1) PF05625 - PAXNEB protein (PAXNEB) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCCTAACGCTCAGCTCCCTTGTTGTATCGCGCACACCGGCAATTCCA
Internal bar code:GACATCGAGGTCTCGTGGCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3773
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTTCTCCCTCTCCTACCA
Suggested primer 2:TACATGCGTACGCCTCATCC