Insertion junction: CLIP2.055678_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.055678
Chromosome:chromosome 17
Location:3795202
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726950 (1 of 1) PTHR11042//PTHR11042:SF102 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED // INTERFERON-INDUCED, DOUBLE-STRANDED RNA-ACTIVATED PROTEIN KINASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCCAACGGCGGCCGCCGCCGCGGCGGCGGCGGCGGCGGCGGCGTCGCT
Internal bar code:TTGCGAACTGACCCTTACGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:469
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCCAAGATGATGCTCATG
Suggested primer 2:ATTCTGGAACCAGGGCACAG