Insertion junction: CLIP2.055679_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055679
Chromosome:chromosome 17
Location:2863166
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718750 FAP309 EF-Hand Containing Flagellar Associated Protein 309; (1 of 1) IPR001763//IPR002048//IPR011992 - Rhodanese-like domain // EF-hand domain // EF-hand domain pair CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAACGCTTCCTGGCGGTCCATTTCTGCAGTTTTGGCACTGCTTCCACG
Internal bar code:GATTCGACCTAATCACCCGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1279
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAGCGCAGAGTAACACAA
Suggested primer 2:GTGCCCACGAAGTCAAACAC