Insertion junction: CLIP2.055682_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055682
Chromosome:chromosome 6
Location:8199288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g306150 (1 of 1) IPR000104//IPR004919 - Antifreeze protein, type I // Domain of unknown function DUF262 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCGGGCGCGCTCTGCGGCACCACCTTCTCCACGTGCAGGCCGCGGATG
Internal bar code:AGAGTAAATATGAAGGTGCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:147
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTCGGAGGTTCGGATTT
Suggested primer 2:GCTGCTGTTAAGATCGCGTG