Insertion junction: CLIP2.055686_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055686
Chromosome:chromosome 10
Location:448931
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420800 C1d-HC2,FAP46 Flagellar central pair-associated protein 46; (1 of 1) PTHR15977//PTHR15977:SF16 - FAMILY NOT NAMED // E030019B06RIK PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACACGGAGACGAACCACAACACGAACGCCTTTCCCCCAGCCGCACCTT
Internal bar code:TCAGCTCAATCAGAGTATTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1006
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGGAAGGTGCGCATCTAC
Suggested primer 2:CACCTCCAGTTGCTCCAGAG