Insertion junction: CLIP2.055696_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.055696
Chromosome:chromosome 9
Location:3931921
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398141 (1 of 2) PTHR24559//PTHR24559:SF208 - FAMILY NOT NAMED // KRAB-A DOMAIN-CONTAINING PROTEIN 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCTAAAGCTACTTCCGCCCGTAGAGCCCGAACCACGTCCGGGTCAGCA
Internal bar code:TAATTTGCTATAGATTTCCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2451
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCAGGTGGTAGTGCCTTG
Suggested primer 2:CAAAAGGTACTCGCGCGATG