Insertion junction: CLIP2.055696_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055696
Chromosome:chromosome 9
Location:3931925
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398141 (1 of 2) PTHR24559//PTHR24559:SF208 - FAMILY NOT NAMED // KRAB-A DOMAIN-CONTAINING PROTEIN 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAACTCTCGATTCGCCAGGGCTTACACCGTGCGTGACGGTCAGTGCTC
Internal bar code:TAATTTGCTATAGATTTCCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4804
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAAGGTACTCGCGCGATG
Suggested primer 2:CCTCAGGTGGTAGTGCCTTG