Insertion junction: CLIP2.055698_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.055698
Chromosome:chromosome 5
Location:837657
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre05.g246100 (1 of 1) IPR019887 - Transcription regulator AsnC-type, C-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGAAGTTGAAGCAAGGGGGGAAGGGGGAAGGAGGGTAGGAAGGGTTT
Internal bar code:TCAAGGTTGTAGATTACGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:387
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGCATCAACTACAGCGC
Suggested primer 2:CGTCTTGTACAGGTGGCTGT