Insertion junction: CLIP2.055707_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055707
Chromosome:chromosome 9
Location:1499722
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399550 (1 of 1) PTHR10857//PTHR10857:SF11 - COPINE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAATCCCACACATGCTCCTCACACATGCATAGGGCCATCGCCGACCACT
Internal bar code:TAAGAGTCTAATAAGGCGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:610
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACATCAACGGCTAACCC
Suggested primer 2:GCCAAGTCAACACCGGAAAC