Insertion junction: CLIP2.055707_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055707
Chromosome:chromosome 9
Location:1499727
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399550 (1 of 1) PTHR10857//PTHR10857:SF11 - COPINE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGCTTTGGTTCGGTGGGGTGTGGTGGCCGTGAGCGTCAGGGGTGTGT
Internal bar code:CTTTCAACTATAACAAGCGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4507
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAAGTCAACACCGGAAAC
Suggested primer 2:TCCACATCAACGGCTAACCC