Insertion junction: CLIP2.055728_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055728
Chromosome:chromosome 9
Location:2965540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393284 RLS8 RegA/Rls-like protein; (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATAGTCCTTCATCGCGGCTGGCCGTATATCACCACGAAGATGAGGCGTT
Internal bar code:TGAGTTCGTTAAGTAATAGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1923
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AATTGCGGTTGGTGTTCGTG
Suggested primer 2:AAACCAGTTCGCAGCGTTTC