Insertion junction: CLIP2.055728_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.055728
Chromosome:chromosome 9
Location:2965553
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393284 RLS8 RegA/Rls-like protein; (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATTGATAGGAGCCAGCTTGTCCATTGGAGCGCACCGGACGGCGTCAGA
Internal bar code:TGAGTTCGTTAAGTAATAGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1414
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCAGTTCGCAGCGTTTC
Suggested primer 2:AATTGCGGTTGGTGTTCGTG