Insertion junction: CLIP2.055731_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.055731
Chromosome:chromosome 1
Location:1931746
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010700 SYP2 Endosomal Qa-SNARE protein, Syntaxin7/Syx7/Pep12/Syp2-family (Qa.III.b); (1 of 1) PF14523 - Syntaxin-like protein (Syntaxin_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGTCGCAGAGGCCCTCAGCACCTCAGCCCAGGTACACTTCGTTACAC
Internal bar code:CCGTTTAGATGAAACATCATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:737
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGAGGGGTGCTTGATGTG
Suggested primer 2:CAGGAGGGCTAACAGCAACA