Insertion junction: CLIP2.055742_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.055742
Chromosome:chromosome 12
Location:6606848
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538801 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGGATGGCGCATGCTTTGTTGATTGTGGAGGCGCCGATGCAGTTGGCA
Internal bar code:AATATCGCGGGCGACTTCTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2957
LEAP-Seq percent confirming:98.3871
LEAP-Seq n confirming:122
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:124

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCAAGACACATATGCAG
Suggested primer 2:TGAACTGGCACCTCCATCAC