Insertion junction: CLIP2.055744_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.055744
Chromosome:chromosome 12
Location:4719734
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522800 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTCCCATCCCATCCCTAACCCCGTGCTTCCCACACACCTTCGTGCTT
Internal bar code:GCCGGTGTCTTGGCGTATTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1194
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CGACCCGGCATTAGCAATTG
Suggested primer 2:ATTTCCTCGTCCGAGTCAGC