Insertion junction: CLIP2.055749_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.055749
Chromosome:chromosome 3
Location:6161187
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g190950 TUA1 (1 of 2) K07374 - tubulin alpha (TUBA); Alpha tubulin 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGTTGAAGGCATCGTCGCCACCGCCAATGGTCTTGTCGGAGGGCATCT
Internal bar code:GAATTTTCACCGTGGGCACCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1425
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCAGCGTAGGAAAAGCTC
Suggested primer 2:GTGGACAGCACCGAGTTGTA