Insertion junction: CLIP2.055760_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055760
Chromosome:chromosome 8
Location:3074345
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g375550 (1 of 25) IPR013216//IPR029063 - Methyltransferase type 11 // S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCACACGGCGTCGCGGACGGTGTTGGGGCAGGGCCGCTTGTATGCGTG
Internal bar code:CGCCCGGCTTATATTGATGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1797
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTGTTAGTTTCGCGCCT
Suggested primer 2:ACGCAGCTTTTCCACTACCA