Insertion junction: CLIP2.055772_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055772
Chromosome:chromosome 9
Location:1536478
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399300 FKB17A,FKB17-1,FKB14 Peptidyl-prolyl cis-trans isomerase, FKBP-type; (1 of 2) PTHR10516//PTHR10516:SF308 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-2, CHLOROPLASTIC-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGATCTGAACCCCCCCCCCCACACACACACACATGTCCGCCCCACCCA
Internal bar code:AGTGCGGTGTGCTGCAGACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:88
LEAP-Seq percent confirming:29.4118
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGATCATGCAGCTCACG
Suggested primer 2:CGTGGGTGTTGTGTACGGTA