Insertion junction: CLIP2.055784_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055784
Chromosome:chromosome 1
Location:6115128
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043400 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATTCCAAGCTGGTTCTGGATACAAACAGCAGACAGACTGCGTGGATTG
Internal bar code:CTGCACGTGGACTGCAGGCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:410
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGTATGCGCCTCAAAAG
Suggested primer 2:CAAAGAGGAGGAGGATGCGG