Insertion junction: CLIP2.055797_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055797
Chromosome:chromosome 11
Location:4301796
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre11.g482450 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGCTTATGCGCCCATCCAGCTGTTCCAGTCCTTTGTGGCCAAGGTAC
Internal bar code:ACTAACCAGAGAAATTTACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:784
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACACACACCT
Suggested primer 2:CGTTGGACTTGTTTGCCAGG