Insertion junction: CLIP2.055799_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055799
Chromosome:chromosome 4
Location:4010945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g232202 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACATGCATGCACAGGCCCCCACGCACCAGGTCGCCGCAAATGCTC
Internal bar code:TTTATAAAGAACGGCTTTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:169
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATCTCCCCACCCAATCT
Suggested primer 2:TGTGACGGCAGTGGTAAGAC