Insertion junction: CLIP2.055801_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055801
Chromosome:chromosome 16
Location:4455383
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g667950 (1 of 5) IPR011051//IPR013096 - RmlC-like cupin domain // Cupin 2, conserved barrel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACCCACCTGCAGGTATGGTGACGCTCTGCCCCACGTGCAGCTCCGAC
Internal bar code:TCATTCGGACAATGACGAAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:3402
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCCACAAACCAAGCTTGA
Suggested primer 2:TTCCCCATGAATTCCACGCA