Insertion junction: CLIP2.055811_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055811
Chromosome:chromosome 11
Location:1329222
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre11.g467706 (1 of 1) PTHR10625//PTHR10625:SF117 - HISTONE DEACETYLASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGATCCTAGCAACAGCACCACCTCCTGCAGCGAGGCACAGTCGGAGG
Internal bar code:GTTAATGCACCCAAGGGATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:707
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTCAAACCACCTTTGCC
Suggested primer 2:CCACCATCTCCGCAGAAGAG