Insertion junction: CLIP2.055813_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.055813
Chromosome:chromosome 7
Location:681246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g317300 ROC78,MAPKKKK1,SIK1 (1 of 1) PTHR24361:SF268 - SERINE/THREONINE-PROTEIN KINASE 3; Mitogen Activated Protein Kinase Kinase Kinase Kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCAACGTTAATTTTGCCACAAACTTACAGAGGATATGGAGTCGGAAG
Internal bar code:GGAAATTGGCAAAATATATGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:183
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GGATCACCTTGATGGCCACA
Suggested primer 2:ATGGATGCCGAAATGGGGTT