Insertion junction: CLIP2.055814_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055814
Chromosome:chromosome 3
Location:4287686
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174100 (1 of 1) IPR013122//IPR015928 - Polycystin cation channel, PKD1/PKD2 // Aconitase/3-isopropylmalate dehydratase, swivel CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCCCACGTGGCGTGCGCGTTCTGCCGCCCGCACGTCCCACAGACTGTA
Internal bar code:GTAAGTGGGTAAGGCAGTTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2579
LEAP-Seq percent confirming:37.037
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TCGACAGACACCGCAATCAA
Suggested primer 2:TCAGGTCGGGTTGGAACATG