Insertion junction: CLIP2.055814_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055814
Chromosome:chromosome 3
Location:4287739
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174100 (1 of 1) IPR013122//IPR015928 - Polycystin cation channel, PKD1/PKD2 // Aconitase/3-isopropylmalate dehydratase, swivel CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGGCTGGCTTGCTGGAGGTGACTGCTTGGGTGGCTGGGTGGTGGCTG
Internal bar code:CGAATATGGGGGTGGTCGCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:859
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGGTCGGGTTGGAACATG
Suggested primer 2:TCGACAGACACCGCAATCAA