Insertion junction: CLIP2.055816_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055816
Chromosome:chromosome 7
Location:4456688
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800831 (1 of 1) IPR000212//IPR014017//IPR027417 - DNA helicase, UvrD/REP type // UvrD-like DNA helicase, C-terminal // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGGGGCTGGTTGGTGTGGGCTGGTTGGTGTGAGACCGCTGGGAGGG
Internal bar code:TTTTTCATTAGGTTATGTTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2540
LEAP-Seq percent confirming:56.25
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ATATAGGCGCTCCATGGCAC
Suggested primer 2:CTGCTGAACTCCTACACGGG