Insertion junction: CLIP2.055818_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055818
Chromosome:chromosome 6
Location:3869428
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278184 (1 of 8) PTHR26379:SF144 - BTB/POZ DOMAIN-CONTAINING PROTEIN 19 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTCGGCTCCTTGCCTGCAGCGCACCACAACACGGAGCGTAAGCATTTG
Internal bar code:TGAATGGCGTTCTTAGGTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2231
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGGAGCATACAACTGGT
Suggested primer 2:AAGTGTGTGGCGAAGTAGGG