Insertion junction: CLIP2.055819_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055819
Chromosome:chromosome 17
Location:1181042
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704450 (1 of 4) PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCATACGTGTGCAGCAACAGCGAGCCCATGGCTTCTAGCGCCGGCGC
Internal bar code:CTGACGAAACTTAGGTGCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4182
LEAP-Seq percent confirming:66.1538
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACACCGCACATTGAAGT
Suggested primer 2:TTGTTTTGAGCCCACGCATG