Insertion junction: CLIP2.055820_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.055820
Chromosome:chromosome 8
Location:29255
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358400 (1 of 4) PF05653 - Magnesium transporter NIPA (Mg_trans_NIPA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTTTCTGCCGTACGAATTCGAGGGAAGCCCACATACGGTATGCGTGC
Internal bar code:AGGCGCTGACACGAGGCTCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1824
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CATCGTGCTGAACATCTGCG
Suggested primer 2:ACGTCCTCAACTTCGTGTCC