Insertion junction: CLIP2.055820_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055820
Chromosome:chromosome 8
Location:29270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358400 (1 of 4) PF05653 - Magnesium transporter NIPA (Mg_trans_NIPA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGAACAATAACCGAATTGGCCGTGCTCTCACCGGCTCCTTGTTGACC
Internal bar code:AGGCGCTGACACGAGGCTCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1551
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCCTCAACTTCGTGTCC
Suggested primer 2:CATCGTGCTGAACATCTGCG