Insertion junction: CLIP2.055836_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055836
Chromosome:chromosome 3
Location:5240410
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g182050 LCS1 (1 of 4) K01897 - long-chain acyl-CoA synthetase (ACSL, fadD); Long-chain acyl-CoA synthetase 5'UTR
Cre03.g182100 IPK,ITPK1 (1 of 1) 2.7.1.134 - Inositol-tetrakisphosphate 1-kinase / Inositol-trisphosphate 6-kinase; Inositol 1%252C3%252C4-trisphosphate 5/6-kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCGGTCTGGTGTTCAGCGGCGCGCTTCTGCATGGTGCGTCTGGCGAA
Internal bar code:GGTGTAGCTCTCAGCAAGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1580
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCCTACAGGACCAACTG
Suggested primer 2:AACTTCTTGGACGTCGCCAT