Insertion junction: CLIP2.055837_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055837
Chromosome:chromosome 2
Location:3177140
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g096700 (1 of 25) IPR000210//IPR011333 - BTB/POZ domain // POZ domain intron
lncRNA_TCONS_00041742 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCTGCAACCCACGCACGGACAGAACCCCGCCCGGAAAAGCAGACTCTC
Internal bar code:CTTTGTTTGCCGAAGTAAGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1316
LEAP-Seq percent confirming:74.6269
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTAGGGGTTGCTGAAGG
Suggested primer 2:ACAAAGTAGATGCAGCCGCT