Insertion junction: CLIP2.055845_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055845
Chromosome:chromosome 1
Location:4676385
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g032400 (1 of 1) PF05118 - Aspartyl/Asparaginyl beta-hydroxylase (Asp_Arg_Hydrox) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGTAATGCACCCCCTGTGGGAAATCGGCGCGGCAGGGTGTTGCAGAAG
Internal bar code:GGCTCTTTTTAGATAGTTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2802
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACCGGTGAATTGCTTGT
Suggested primer 2:ATGGAAGGGAACTGCAGCTC