Insertion junction: CLIP2.055851_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.055851
Chromosome:chromosome 1
Location:323334
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001800 MLCK1,FAP403 (1 of 4) PTHR24361//PTHR24361:SF411 - MITOGEN-ACTIVATED KINASE KINASE KINASE // SUBFAMILY NOT NAMED; Flagellar Associated Protein 403 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTAGCATCAGCAGGCACTGCATCCTTAGCACAGCAGAGGGCAGACTCC
Internal bar code:CGACTAGGTTCTTTGATGGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:442
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCTTCCTCTGGGGCTTGC
Suggested primer 2:CATACAGCACACACCCCAGT