Insertion junction: CLIP2.055859_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.055859
Chromosome:chromosome 16
Location:5277589
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684000 (1 of 1) PTHR23153//PTHR23153:SF36 - UBX-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGTGCAACAGAAGCTGCGGCAGGCCTGGGCCGCAGTAACACAGCTGGC
Internal bar code:ATGTTCCTTAGCAGGCCCCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:603
LEAP-Seq percent confirming:21.0526
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AACCCATGCCGAGAGAACTG
Suggested primer 2:GATATGGTGCAGGAGGAGGC