Insertion junction: CLIP2.055860_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055860
Chromosome:chromosome 12
Location:237414
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485050 CAH6 Carbonic Anhydrase 6; (1 of 3) PTHR11002//PTHR11002:SF17 - CARBONIC ANHYDRASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAGCCTTGAAAAGATCAATTCGCTCACGGATAGGGCATCGCCTGAGC
Internal bar code:GGTTACCTGAGGGGGTAGATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:538
LEAP-Seq percent confirming:35.7143
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGTTCTCCTTCACCACG
Suggested primer 2:TCATTTTTGTGAAGGCCGCG