Insertion junction: CLIP2.055863_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.055863
Chromosome:chromosome 6
Location:2770470
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g271400 PGP3 (1 of 3) 3.1.3.18 - Phosphoglycolate phosphatase; Phosphoglycolate phosphatase/4-nitrophenylphosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGTCCATGCGTGGTGTGACTGGCTGGGCGGGTGCAAGGTGGCCCAGC
Internal bar code:ATCTTCGAATCTGTGGCCCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1819
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATGCCCAGAAATCCCCA
Suggested primer 2:GTTCACACACTCACACACGC