Insertion junction: CLIP2.055866_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055866
Chromosome:chromosome 2
Location:1572577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084800 SPO11A (1 of 1) K10878 - meiotic recombination protein SPO11 (SPO11); meoisis-related DNA topoisomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGTTCTCTTTCTGGCGTCGCTCATCCAGGCTTGCCGTCCGGCCCCAG
Internal bar code:CCTATGGGCCCATGTGGGACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1776
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATGATGCAGGGGTAGGT
Suggested primer 2:CAAACTGTTTGAGGTGCGGG