Insertion junction: CLIP2.055871_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055871
Chromosome:chromosome 4
Location:1768715
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g211900 ELG35,ELG37 Exostosin-like glycosyltransferase 37; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTGGCTGGCCCCCTCTCAGCCAACCCTGGTTTCGTGGTTTTTGCCCG
Internal bar code:AGTTGTTCCAAAAACTAAGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:924
LEAP-Seq percent confirming:57.6923
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TACACACGCATGCACTCACT
Suggested primer 2:GCAAACAAGGTGCAGAGGTG