Insertion junction: CLIP2.055873_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055873
Chromosome:chromosome 1
Location:6133332
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043550 (1 of 3) IPR000104//IPR004333 - Antifreeze protein, type I // Transcription factor, SBP-box intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACATCATCGCGCTATCTGACGCACCAGCAAACACGCTAGACAACCAA
Internal bar code:GCAGGTTGTGTTAGCGGGCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3645
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCAGCAGAATCTTCCGT
Suggested primer 2:CGCGCATCATGTATATGCCG