Insertion junction: CLIP2.055879_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.055879
Chromosome:plastome
Location:134903
Confidence (%):40
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTGTCTTTAAACCAGATGTCTAAACATTTTGCTTTTCCAAATACTATA
Internal bar code:GCGGTAGCGGTGGTGGTCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:101
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGTTACCCATGTGCGAGG
Suggested primer 2:GCTACACAGCTAATCGGGCA