Insertion junction: CLIP2.055882_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055882
Chromosome:chromosome 16
Location:6743988
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672750 (1 of 2) K14944 - RNA-binding protein Nova (NOVA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACTCCCGACAGCGGCACCCAACCCCCGCCACGTACCGCGTCCTCGGGC
Internal bar code:GTTCGGTAAGTAATACGTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:877
LEAP-Seq percent confirming:47.8261
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AATTCCATCGCTGGTTCGGT
Suggested primer 2:CGAGCGCAGATGGGAACTAT