Insertion junction: CLIP2.055887_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055887
Chromosome:chromosome 4
Location:1498254
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213800 (1 of 1) PTHR10825//PTHR10825:SF5 - RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT // E3 UBIQUITIN-PROTEIN LIGASE RING1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAAGGATTGCCCTGTGTGCCGGACCAACCTGCATAGCAGGCGCTCACT
Internal bar code:CGTGCATTAATTTCTGCTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:329
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGACAAGTCAATGGGCA
Suggested primer 2:CCGGTTTGCTTTGGTGAGTG