Insertion junction: CLIP2.055898_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.055898
Chromosome:chromosome 12
Location:1946208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g511600 (1 of 1) PTHR13196//PTHR13196:SF14 - DENN DOMAIN-CONTAINING // PROTEIN RME-4, ISOFORM A intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACTACGGCAGCCGACGCTCATTACAGCGGCCGCGCCCGACACGCCCA
Internal bar code:ACCGGTACCGCCTACAAGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1845
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTGAACCACCTGCAAGC
Suggested primer 2:GAGTTCACTCGCAGGTTCCA