Insertion junction: CLIP2.055905_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.055905
Chromosome:chromosome 3
Location:4620739
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176866 NAP1,NAP conserved protein of unknown function CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGATATCCAAATGCCGCAGTGCCGGCAGCGCTCGCCGCAACTCTGCC
Internal bar code:CGTGACGTGTGTTAGGAGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:116
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGGATGAGGACGAAGACG
Suggested primer 2:ATTGTGCTGGTTCGTTTGGC