Insertion junction: CLIP2.055910_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055910
Chromosome:chromosome 12
Location:8217703
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTCGCGGACGCCATGAGGGCCTCGAGCTCGAAGCCAGCGGATGTGAGG
Internal bar code:GTAGGGTCGTCCTAGAGTTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2495
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAACTACACCACGACGAC
Suggested primer 2:GGTACTGCCCGTGAACATGA