Insertion junction: CLIP2.055927_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055927
Chromosome:chromosome 6
Location:3982365
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278206 CDS
Cre06.g800666 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTATGCTGGTGCCCTTGAACTCGCAGTTGTAGAACTCCTCCAGCTTGT
Internal bar code:AAAAGATTGTTGGTGGCAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3262
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CACCGCGTCTACCCAGATAC
Suggested primer 2:CTGCTGGCCCACTAGCTATC