Insertion junction: CLIP2.055931_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055931
Chromosome:chromosome 5
Location:3163814
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232002 ACX2 Acyl-CoA oxidase/dehydrogenase; (1 of 2) PTHR10909//PTHR10909:SF317 - ELECTRON TRANSPORT OXIDOREDUCTASE // ACYL-COENZYME A OXIDASE 2, PEROXISOMAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTCATGGGGGGAGGGAAGATGGAGGGGCGGGAGGGGAGGGAGGGGAAG
Internal bar code:CACTTAAGGTCATAGATGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:363
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGGAGATGTGTGCATGG
Suggested primer 2:TCCAGTCAGTGTCGCTTGAC