Insertion junction: CLIP2.055933_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055933
Chromosome:chromosome 17
Location:3789855
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726950 (1 of 1) PTHR11042//PTHR11042:SF102 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED // INTERFERON-INDUCED, DOUBLE-STRANDED RNA-ACTIVATED PROTEIN KINASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGTGCCTCTCCCTCTCCCTGTGCGGGCAAGCGCACCGCGAAACGGCTT
Internal bar code:TGTAGTTGAGATCTAGTTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1704
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTAAGCTGAGCTCTGGCC
Suggested primer 2:CAGAGGGGCACTAACTTGCA